15. An Evolutionarily Conserved Long Noncoding RNA TUNA Controls Pluripotency and Neural Lineage Commitment. Nianwei Lin, Kung-Yen Chang, Zhonghan Li, Keith Gates, Zacharia A. Rana, Jason Dang, Danhua Zhang, Tianxu Han, Chao-Shun Yang, Thomas J. Cunningham, Steven R. Head, Gregg Duester, P. Duc Si Dong, Tariq M. Rana. Molecular Cell. 2014 Feb 11 (online). PMID: 24530304.

14. Specification of hepatopancreas progenitors in zebrafish by hnf1ba and wnt2bb. Lancman JJ, Zvenigorodsky N, Gates KP, Zhang D, Solomon K, Humphrey RK, Kuo T, Setiawan L, Verkade H, Chi YI, Jhala US, Wright CV, Stainier DY, Dong PD. Development. 2013 Jul;140(13):2669-79. PMID: 23720049.

13. The Wnt/planar cell polarity (PCP) protein tyrosine kinase-7 (PTK7) is a highly efficient proteolytic target of membrane type-1 matrix metalloproteinase (MT1-MMP): implications in cancer and embryogenesis. Vladislav S. Golubkov, Alexei V. Chekanov, Piotr Cieplak, Alexander E. Aleshin, Andrei V. Chernov, Wenhong Zhu, Ilian A. Radichev, Danhua Zhang, P.D.S. Dong, and Alex Y. Strongin. J Biol Chem. 2010 Sep 13 (Epub ahead of print) PMID: 20837484.

12. Loss of Dnmt1 catalytic activity reveals multiple roles for DNA methylation during pancreas development and regeneration. Anderson RM, Bosch JA, Goll MG, Hesselson D, P.D.S. Dong, Shin D, Shin CH, Schelgel A, Abdelilah-Halpern M, Stainier DY. J Biol Chem. Developmental Biology

11. Regulation of neurocoel morphogeneis by Pard6gammab. Munson C, Huisken J, Bit-Avragim N, Kuo T, P.D.S. Dong, Ober EA, Verkade H, Abdelilah-Seyfried S, Stainier DY. Developmental Biology. 2008 Dec 1;324(1):41-54. PMID: 18817769.

10. Organ-specific requirements for Hdac1 in liver and pancreas formation. Emily S. Noël, Antonio Casal-Sueiro, Elisabeth Busch-Nentwich, Heather Verkade, P.D.S. Dong, Derek L. Stemple and Elke A. Ober (2008). Developmental Biology July 21. PMID: 18687323.

9. Graded levels of Ptf1a differentially regulate endocrine and exocrine fates in the developing pancreas. P.D.S. Dong, Elayne Provost, Steven Leach & Didier Y. R. Stainier* (2008). Genes & Development 22: 1445-1450. PMCID: PMC2418581. cover article.

8. Fgf10 regulates hepatopancreatic ductal system patterning and differentiation. P.D.S. Dong, Chantilly A. Munson, William Norton, Cecile Crosnier, Xiufang Pan, Zhiyuan Gong, Carl J. Neumann & Didier Y. R. Stainier (2007). Nature Genetics 39:397-402.

7. Formation of the digestive system in zebrafish. III. Intestinal epithelium morphogenesis. Annie N.Y Ng, Tanya A de Jong-Curtain, David J Mawdsley, Sara J White, Jimann Shin, Bruce Appel, P.D.S. Dong, Didier Y.R. Stainier, Joan K. Heath (2005). Developmental Biology 286(1):114-35. PMID: 16125164.

6. Formation of the digestive system in zebrafish. II. Pancreas morphogenesis. Field, H. A., P.D.S. Dong, D. Beis, and D.Y.R. Stainier (2003). Developmental Biology 261:197-208. PMID: 12941629.

5. Drosophila spalt/spalt-related mutants exhibit Townes–Brocks’ Syndrome phenotypes. Dong, P.D.S., S.V. Todi, D.F. Eberl, and G. Boekhoff-Falk (2003). PNAS 100(18):10293-8. PMID: 12925729.

4. Distal-less and homothorax regulate multiple targets to pattern the Drosophila antenna. Dong, P.D.S., J.S. Dicks and G. Panganiban (2002). Development 129:1967-1974. PMID: 11934862.

3. Limb type-specific regulation of bric a brac contributes to morphological diversity. Chu, J., P.D.S. Dong, and G. Panganiban (2002). Development 129:695-704. PMID: 11830570.

2. Proximodistal domain specification and interactions in the developing Drosophila appendages. Dong, P.D.S., J. Chu, and G. Panganiban (2001). Development 128:2365-2372. PMID: 11493555.

1. Coexpression of the homeobox genes Distal-less and homothorax determines Drosophila antennal identity. Dong, P.D.S., J. Chu, and G. Panganiban (2000). Development 127:209-216. PMID: 10603339.